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  1. 医歯学総合研究科
  2. 医歯学総合研究科・博士論文

Genome-wide transcriptome analysis of fluoroquinolone resistance in clinical isolates of Escherichia coli

http://hdl.handle.net/10232/00030317
http://hdl.handle.net/10232/00030317
885c08e3-629c-4e8b-b4cd-2fb8d3345a6e
名前 / ファイル ライセンス アクション
Diss_山根_隆史_ISK308_2014.pdf Diss_山根_隆史_ISK308_2014 (276.3 kB)
Abstract_山根_隆史_4504810387_2014.pdf Abstract_山根_隆史_4504810387_2014 (112.1 kB)
Result_Yamane_Takashi_isk_308_2018.pdf Result_Yamane_Takashi_isk_308_2018 (812.1 kB)
Comments_Yamane_Takashi_isk_308_2018.pdf Comments_Yamane_Takashi_isk_308_2018 (397.5 kB)
Item type 学位論文 / Thesis or Dissertation(1)
公開日 2018-08-01
タイトル
タイトル Genome-wide transcriptome analysis of fluoroquinolone resistance in clinical isolates of Escherichia coli
別言語のタイトル
その他のタイトル 尿路由来大腸菌のフルオロキノロン耐性遺伝子についての解析
著者 山根, 隆史

× 山根, 隆史

WEKO 132047

山根, 隆史

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著者よみ
姓名 ヤマネ, タカシ
別言語の著者
姓名 YAMANE, Takashi
言語
言語 eng
キーワード
主題言語 en
主題Scheme Other
主題 Escherichia coli
キーワード
主題言語 en
主題Scheme Other
主題 fluoroquinolone resistance
キーワード
主題言語 en
主題Scheme Other
主題 microarray
資源タイプ
資源タイプ識別子 http://purl.org/coar/resource_type/c_db06
資源タイプ doctoral thesis
アクセス権
アクセス権 open access
アクセス権URI http://purl.org/coar/access_right/c_abf2
要約(Abstract)
内容記述タイプ Other
内容記述 Objectives: Coincident with their worldwide use, resistance to fluoroquinolones in Escherichia coli has increased.To identify the gene expression profiles underlying fluoroquinolone resistance, we carried out genome-wide transcriptome analysis of fluoroquinolone-sensitiveE. coli.
Methods: Four fluoroquinolone-sensitive E. coli and five fluoroquinolone-resistant E. coli clinical isolates were subjected to complementary deoxyribonucleic acid icroarray analysis. Some upregulated genes’ expression was verified by real-time polymerase chain reaction using 104 E. coli clinical isolates, and minimum inhibitory concentration tests were carried out by using their transformants.
Results: A total of 40 genes were significantly upregulated influoroquinolone-resistant E. coli isolates (P<0.05). The expression of phage shock protein operons, which are involved in biofilm formation, was markedly upregulated in our profile of fluoroquinolone-resistant E. coli. One of the phage shock protein operons, pspC, was significantly upregulated in 50 fluoroquinolone-resistant E. coli isolates (P<0.0001).
The expression of type I fimbriae genes, which are pilus operons involved in biofilm formation, were markedly downregulated in fluoroquinolone-resistant E. coli. Deoxyri-bonucleic acid adenine methyltransferase (dam), which represses type I fimbriae genes, was significantly upregulated in the clinical fluoroquinolone-resistant E. coli iso-lates (P=0.007). We established pspC- and dam-expressing E. coli transformants from fluoroquinolone-sensitive E. coli, and the minimum inhibitory concentration tests showed that the transformants acquired fluoroquinolone resistance, suggesting that upregulation of these genes contributes to acquiring fluoroquinolone resistance.
Conclusions: Upregulation of psp operones and dam underlying pilus operons down-regulation might be associated with fluoroquinolone resistance in E. coli.
収録雑誌名 INTERNATIONAL JOURNAL OF UROLOGY

巻 19, p. 360-368, 発行日 2012
権利
権利情報 © 2011 The Japanese Urological Association
情報源
識別子タイプ URI
関連識別子 https://onlinelibrary.wiley.com/journal/14422042
出版タイプ
出版タイプ VoR
出版タイプResource http://purl.org/coar/version/c_970fb48d4fbd8a85
NDC
主題Scheme NDC
主題 491
ファイル(説明)
内容記述タイプ Other
内容記述 博士論文全文
ファイル(説明)
内容記述タイプ Other
内容記述 博士論文要旨
ファイル(説明)
内容記述タイプ Other
内容記述 最終試験結果の要旨
ファイル(説明)
内容記述タイプ Other
内容記述 論文審査の要旨
公開者・出版者
出版者 The Japanese Urological Association
公開者・出版者
出版者 鹿児島大学
公開者よみ
公開者よみ カゴシマ ダイガク
公開者別名
公開者別名 Kagoshima University
関連(hasPart)
識別子タイプ URI
関連識別子 https://doi.org/10.1111/j.1442-2042.2011.02933.x
備考
備考 【指導教員:中川昌之】
学位名
学位名 博士(医学)Doctor of Philosophy in Medical Science
学位授与機関
学位授与機関識別子Scheme kakenhi
学位授与機関識別子 17701
学位授与機関名 鹿児島大学
学位授与年月日
学位授与年月日 2014-11-17
学位授与番号
学位授与番号 甲総研第308号
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